LAMP Human NUDT15 Deficiency KIT
The LAMP Human NUDT15 deficiency KIT is an in vitro diagnostic test intended for the qualitative detection of three different NUDT15 alleles (*3, *6, 9*) by Loop-mediated isothermal amplification (LAMP) on EDTA whole blood and extracted DNA.
This assay is dedicated to professional use in diagnostic laboratories. The device is not for self-testing.
Regulatory Status: CE-IVD
Format: 24 reactions
Target gene: NUDT15 (NUDIX hydrolase 15)
Drug relevance: Thiopurines - azathioprine, 6-mercaptopurine, 6-thioguanine (reduced NUDT15 activity → thiopurine hpersensitivity / severe toxicity). Complementary to TPMT.
Variants detected: NUDT15*3 (rs116855232), *6 (rs746071566, c.55_56insGAGTCG), *9 (rs746071566, c.50delGAGTCG)
Method: LAMP + meting curve analysis
Sample: EDTA whole blood - no DNA extraction required - or extracted DNA
Compatible instruments: LightCycler 480 I&II / Cobas z 480 (Roche); CFX96 / CFX Opus 96 (Bio-Rad); QuantStudio 1/3/5 & 6/7 Flex (Applied Biosystems); MIC qPCR (Bio Molecular Systems); LC-Genie III & Genie HT (Optigene)
Software / result interpretation: Automated genotype calling via GeneFox software; mandatory visual confirmation of the melting curve
Turn around time: < 1h
General information
Advantages
NUDIX hydrolase 15 (NUDT15) is an enzyme directly involved in the metabolism of thiopurines, a class of immunosuppressive drugs, as it catalyzes the conversion of active metabolites into less toxic metabolites. Thiopurines are the mainstay in the treatment of several forms of cancer, immune system disorders and the prevention of rejection after organ transplantation. Individuals with reduced or absent NUDT15 activity have a higher sensitivity to thiopurines at standard doses and are at a higher risk of toxic side effects.
Genetic variations in the TPMT and NUDT15 genes strongly influence the safety of thiopurine therapy. The genotyping of NUDT15 is therefore complementary to the identification of the TPMT risk allele: the latter is the main genetic cause of thiopurine intolerance in Europeans and Africans, while NUDT15 deficiency is most common among in Asians.
Background information
The LC-NUDT15-LP kit uses loop mediated isothermal amplification, a robust amplification method using four to six primers per target, that can be directly used on EDTA whole blood samples, without DNA purification and on extracted DNA samples from whole blood samples.
The genotyping is performed by melting curve analysis after amplification, using a specific probe and quencher for each target polymorphisms.
Test principle
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