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LAMP Human DPD Deficiency KIT - DPYD*6

The LAMP Human DPD6 KIT is an in vitro diagnostic test intended for the qualitative detection of the less functional DPYD allele *6 by Loop-mediated isothermal amplification (LAMP).

This assay is dedicated to professional use in diagnostic laboratories. The device is not for self-testing.

Regulatory Status: RUO

Format: 24 reactions 

Target gene: DPYD

Drug relevance: Fluoropyrimidines, including drugs like 5-fluorouracil (5-FU), capecitabine, and tegafur

Variants detected: DPYD*6 (rs1801160)

Method: LAMP + meting curve analysis 

Sample: EDTA whole blood - no DNA extraction required - or extracted DNA

Compatible instruments: LightCycler 480 I&II / Cobas z 480 (Roche); CFX96 / CFX Opus 96 (Bio-Rad); QuantStudio 1/3/5 & 6/7 Flex (Applied Biosystems); MIC qPCR (Bio Molecular Systems); LC-Genie III & Genie HT (Optigene)

Turn around time: < 1h 

General information

Advantages

icon fast
Fast
icon No-DNA-extraction
No DNA extraction
icon comprehensive
Compatible with a variety of qPCR machines
icon easy-to-use
Automatic interpretation of the results

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The LAMP Human DPD5var KIT is an in vitro diagnostic test intended for the qualitative detection of four different non-functional or less functional DPYD alleles by Loop-mediated isothermal amplification (LAMP) on EDTA whole blood and extracted DNA.
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The LAMP Human DPDrs11 KIT is an in vitro diagnostic test intended for the qualitative detection of the less functional DPYD allele c.557A>G (rs115232898) by Loop-mediated isothermal amplification (LAMP) on EDTA whole blood and extracted DNA.

The assay with the “LAMP Human DPD Deficiency KIT-DPYD*6” is performed on whole blood samples either freshly collected or stored at -20°C, or on extracted DNA samples.


The “LAMP Human DPD Deficiency KIT-DPYD*6” contains 6 specific primers allowing the loop-mediated amplification of a specific region surrounding the polymorphism. Each amplified target sequence is detected by a probe through the detection of fluorescence variation. After amplification, the temperature is decreased to 40°C and the probe hybridizes the amplified fragment, bringing the fluorophore and the quencher in proximity, resulting in quenching of the fluorescence. During the melting curve analysis, the temperature is gradually increased while the change in fluorescence emission is measured. The probe will detach differently from amplified wild type DNA fragments and mutated DNA fragments, therefore, the change in fluorescence will be observed at a different temperature, allowing to make the difference between homozygous mutated, heterozygous mutated or wild type for the DPYD*6 allele.

Test principle

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